DESCRIPTION

Package: iMKT
Title: Integrative McDonald and Kreitman Test
Version: 0.1.1
Date: 2017-12-01
Description: iMKT is an R package to compute the McDonald and Kreitman test (McDonald 
    and Kreitman 1991 Nature) on polymorphism and divergence genomic data provided by 
    the user or automatically downloaded from PopFly (Hervas et al. 2017 Bioinformatics)
    or PopHuman (Casillas et al. 2018 Nucleic Acids Res.). It includes five MK derived 
    methodologies which allow inferring the rate of adaptive evolution (alpha) as well as
    the fraction of strongly deleterious (d), weakly deleterious (b), and neutral (f) sites.
Author: Sergi Hervas <sergi.hervas@uab.cat> 
    Marta Coronado <marta.coronado@uab.cat>
    Jesús Murga <jesus.murga@uab.cat>
Maintainer: Jesús Murga <jesus.murga@uab.cat>
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.0
Depends: R (>= 3.3), ggplot2
Imports: knitr, utils, stats, cowplot, reshape2, nls2, MASS, ggthemes
VignetteBuilder: knitr