Publications

Below we list journal papers that use results of simulations using ADDA. They are sorted by authors' last names within each year; the latter are listed in reverse chronological order. Those (review) papers, which only mention ADDA, are not included. The list is updated in bulk approximately once a year. If you know a missing paper from previous years, please create and issue. Similar list of papers with full bibliographic data can be found in Zotero library.

2015 (12)

1. L. Bi and P. Yang, “Impact of calcification state on the inherent optical properties of Emiliania huxleyi coccoliths and coccolithophores,” J. Quant. Spectrosc. Radiat. Transfer 155, 10–21 (2015).
2. O. Kemppinen, T. Nousiainen, and H. Lindqvist, “The impact of surface roughness on scattering by realistically shaped wavelength-scale dust particles,” J. Quant. Spectrosc. Radiat. Transfer 150, 55–67 (2015).
3. J. Leinonen and D. Moisseev, “What do triple-frequency radar signatures reveal about aggregate snowflakes?,” J. Geophys. Res. Atmos. 120, 229–239 (2015).
4. C. Liu, P. Yang, S. L. Nasiri, S. Platnick, K. G. Meyer, C. Wang, and S. Ding, “A fast Visible Infrared Imaging Radiometer Suite simulator for cloudy atmospheres,” J. Geophys. Res. Atmos. 120, 240–255 (2015).
5. A. A. Lyamkina and S. P. Moshchenko, “Influence of localized surface plasmon in a lens-shaped metal cluster on the decay dynamics of a point-dipole emitter,” J. Quant. Spectrosc. Radiat. Transfer 156, 12–16 (2015).
6. A. B. Milstein and J. M. Richardson, “Comparison of models and measurements of angle-resolved scatter from irregular aerosols,” J. Quant. Spectrosc. Radiat. Transfer 151, 110–122 (2015).
7. K. Skorupski, “Using the DDA (discrete dipole approximation) method in determining the extinction cross section of black carbon,” Metrol. Meas. Syst. 22, 153–164 (2015).
8. K. Skorupski, J. Hellmers, W. Feng, J. Mroczka, T. Wriedt, and L. Mädler, “Influence of sintering necks on the spectral behaviour of ITO clusters using the Discrete Dipole Approximation,” J. Quant. Spectrosc. Radiat. Transfer 159, 11–18 (2015).
9. D. A. Smunev, P. C. Chaumet, and M. A. Yurkin, “Rectangular dipoles in the discrete dipole approximation,” J. Quant. Spectrosc. Radiat. Transfer 156, 67–79 (2015).
10. Y. Wu, T. Cheng, L. Zheng, H. Chen, and H. Xu, “Single scattering properties of semi-embedded soot morphologies with intersecting and non-intersecting surfaces of absorbing spheres and non-absorbing host,” J. Quant. Spectrosc. Radiat. Transfer 157, 1–13 (2015).
11. Y. Wu, M. Yang, X. Sheng, and K. F. Ren, “Computation of scattering matrix elements of large and complex shaped absorbing particles with multilevel fast multipole algorithm,” J. Quant. Spectrosc. Radiat. Transfer 156, 88–96 (2015).
12. P. Yang, K.-N. Liou, L. Bi, C. Liu, B. Yi, and B. A. Baum, “On the radiative properties of ice clouds: Light scattering, remote sensing, and radiation parameterization,” Adv. Atmos. Sci. 32, 32–63 (2015).

2014 (25)

1. L. Bi and P. Yang, “Accurate simulation of the optical properties of atmospheric ice crystals with the invariant imbedding T-matrix method,” J. Quant. Spectrosc. Radiat. Transfer 138, 17–35 (2014).
2. J. Bogdanowicz and W. Vandervorst, “On the understanding of local optical resonance in elongated dielectric particles,” J. Quant. Spectrosc. Radiat. Transfer 146, 175–180 (2014).
3. P. R. Colarco, E. P. Nowottnick, C. A. Randles, B. Yi, P. Yang, K.-M. Kim, J. A. Smith, and C. G. Bardeen, “Impact of radiatively interactive dust aerosols in the NASA GEOS-5 climate model: Sensitivity to dust particle shape and refractive index,” J. Geophys. Res. Atmos. 119, 753–786 (2014).
4. B. H. Cole, P. Yang, B. A. Baum, J. Riedi, and L. C.-Labonnote, “Ice particle habit and surface roughness derived from PARASOL polarization measurements,” Atmos. Chem. Phys. 14, 3739–3750 (2014).
5. V. G. Farafonov and V. B. Il’in, “Analytical long-wavelength approximation for parallelepipeds,” J. Quant. Spectrosc. Radiat. Transfer 146, 244–249 (2014).
6. V. G. Farafonov and V. B. Il’in, “Rayleigh approximation for light scattering at parallelepipeds,” J. Opt. Technol. 81, 375–381 (2014).
7. M. M. Kugeiko and D. A. Smunev, “Method for determining the asphericity and microphysical parameters of erythrocytes from the directional scattering coefficient,” Opt. Spectrosc. 117, 679–685 (2014).
8. H. Lindqvist, O. Jokinen, K. Kandler, D. Scheuvens, and T. Nousiainen, “Single scattering by realistic, inhomogeneous mineral dust particles with stereogrammetric shapes,” Atmos. Chem. Phys. 14, 143–157 (2014).
9. C. Liu, R. L. Panetta, and P. Yang, “Inhomogeneity structure and the applicability of effective medium approximations in calculating light scattering by inhomogeneous particles,” J. Quant. Spectrosc. Radiat. Transfer 146, 331–348 (2014).
10. Y. Lu, K. Aydin, E. E. Clothiaux, and J. Verlinde, “Dielectric constant adjustments in computations of the scattering properties of solid ice crystals using the Generalized Multi-particle Mie method,” J. Quant. Spectrosc. Radiat. Transfer 135, 1–8 (2014).
11. Y. Lu, E. E. Clothiaux, K. Aydin, and J. Verlinde, “Estimating ice particle scattering properties using a modified Rayleigh-Gans approximation,” J. Geophys. Res. Atmos. 119, 10471–10484 (2014).
12. E. Massa, T. Roschuk, S. A. Maier, and V. Giannini, “Discrete-dipole approximation on a rectangular cuboidal point lattice: considering dynamic depolarization,” J. Opt. Soc. Am. A 31, 135–140 (2014).
13. A. E. Moskalensky, D. I. Strokotov, A. V. Chernyshev, V. P. Maltsev, and M. A. Yurkin, “Additivity of light-scattering patterns of aggregated biological particles,” J. Biomed. Opt. 19, 085004 (2014).
14. D. Ori, T. Maestri, R. Rizzi, D. Cimini, M. Montopoli, and F. S. Marzano, “Scattering properties of modeled complex snowflakes and mixed-phase particles at microwave and millimeter frequencies”, J. Geophys. Res. Atmos. 119, 9931–9947 (2014).
15. D. I. Podowitz, C. Liu, P. Yang, and M. A. Yurkin, “Comparison of the pseudo-spectral time domain method and the discrete dipole approximation for light scattering by ice spheres,” J. Quant. Spectrosc. Radiat. Transfer 146, 402–409 (2014).
16. M. Potenza and P. Milani, “Free nanoparticle characterization by optical scattered field analysis: opportunities and perspectives,” J Nanopart Res 16, 1–15 (2014).
17. J. Räbinä, S. Mönkölä, T. Rossi, A. Penttilä, and K. Muinonen, “Comparison of discrete exterior calculus and discrete-dipole approximation for electromagnetic scattering,” J. Quant. Spectrosc. Radiat. Transfer 146, 417–423 (2014).
18. A. Sokołowska, J. Rudnicki, M. Kostecki, S. Wojtkiewicz, P. Sawosz, R. Chodun, K. Zdunek, and A. Olszyna, “Electric field used as the substitute for ultrasounds in the liquid exfoliation of hexagonal boron nitride,” Microel. Engin. 126, 124–128 (2014).
19. J. Tyynelä, J. Leinonen, D. Moisseev, T. Nousiainen, and A. von Lerber, “Modeling radar backscattering from melting snowflakes using spheroids with nonuniform distribution of water,” J. Quant. Spectrosc. Radiat. Transfer 133, 504–519 (2014).
20. A. Virkki, K. Muinonen, and A. Penttilä, “Radar albedos and circular-polarization ratios for realistic inhomogeneous media using the discrete-dipole approximation,” J. Quant. Spectrosc. Radiat. Transfer 146, 480–491 (2014).
21. A. Wang, T. G. Dimiduk, J. Fung, S. Razavi, I. Kretzschmar, K. Chaudhary, and V. N. Manoharan, “Using the discrete dipole approximation and holographic microscopy to measure rotational dynamics of non-spherical colloidal particles,” J. Quant. Spectrosc. Radiat. Transfer 146, 499–509 (2014).
22. C. Wang, P. Yang, A. Dessler, B. A. Baum, and Y. Hu, “Estimation of the cirrus cloud scattering phase function from satellite observations,” J. Quant. Spectrosc. Radiat. Transfer 138, 36–49 (2014).
23. C. Wang, P. Yang, and X. Liu, “A high-spectral-resolution radiative transfer model for simulating multilayered clouds and aerosols in the infrared spectral region,” J. Atmos. Sci. 72, 926–942 (2014).
24. C. Yuen and Q. Liu, “Towards in vivo intradermal surface enhanced Raman scattering (SERS) measurements: silver coated microneedle based SERS probe,” J. Biophoton. 7, 683–689 (2014).
25. Q. Zhang and J. E. Thompson, “Effect of particle mixing morphology on aerosol scattering and absorption: A discrete dipole modeling study,” GeoResJ 3–4, 9–18 (2014).

2013 (30)

1. S. Amini, Y. You, G. W. Kattawar, and K. E. Meissner, “Effect of surrounding inhomogeneities on whispering gallery modes in spherical resonators,” Appl. Opt. 52, 690–697 (2013).
2. G. Apostolopoulos, S. V. Tsinopoulos, and E. Dermatas, “A methodology for estimating the shape of biconcave red blood cells using multicolor scattering images,” Biomed. Signal Proc. Contr. 8, 263–272 (2013).
3. L. Bi and P. Yang, “Modeling of light scattering by biconcave and deformed red blood cells with the invariant imbedding T-matrix method,” J. Biomed. Opt 18, 055001 (2013).
4. L. Bi, P. Yang, G. W. Kattawar, and M. I. Mishchenko, “Efficient implementation of the invariant imbedding T-matrix method and the separation of variables method applied to large nonspherical inhomogeneous particles,” J. Quant. Spectrosc. Radiat. Transfer 116, 169–183 (2013).
5. S. D’Agostino, F. Alpeggiani, and L. C. Andreani, “Strong coupling between a dipole emitter and localized plasmons: enhancement by sharp silver tips,” Opt. Express 21, 27602–27610 (2013).
6. S. D’Agostino, F. Della Sala and L. C. Andreani, “Dipole decay rates engineering via silver nanocones”, Plasmonics 8, 1079–1086 (2013),
7. S. D’Agostino, F. Della Sala, and L. C. Andreani, “Dipole-excited surface plasmons in metallic nanoparticles: Engineering decay dynamics within the discrete-dipole approximation,” Phys. Rev. B 87, 205413 (2013).
8. S. D’Agostino, F. Della Sala, and L. C. Andreani, “Radiative coupling of high-order plasmonic modes with far-field,” Photon. Nanostruct. Fundam. Applic. 11, 335–344 (2013).
9. S. Freddi, L. Sironi, R. D’Antuono, D. Morone, A. Donà, E. Cabrini, L. D’Alfonso, M. Collini, P. Pallavicini, et al., “A molecular thermometer for nanoparticles for optical hyperthermia,” Nano Lett. 13, 2004–2010 (2013).
10. M. Gao, P. Yang, and G. W. Kattawar, “Polarized extinction properties of plates with large aspect ratios,” J. Quant. Spectrosc. Radiat. Transfer 131, 72–81 (2013).
11. M. Gao, P. Yang, D. McKee, and G. W. Kattawar, “Mueller matrix holographic method for small particle characterization: theory and numerical studies,” Appl. Opt. 52, 5289–5296 (2013).
12. A. I. Konokhova, A. A. Gelash, M. A. Yurkin, A. V. Chernyshev, and V. P. Maltsev, “High-precision characterization of individual E. coli cell morphology by scanning flow cytometry,” Cytometry A 83A, 568–575 (2013).
13. J. Liu and G. W. Kattawar, “Detection of dinoflagellates by the light scattering properties of the chiral structure of their chromosomes,” J. Quant. Spectrosc. Radiat. Transfer 131, 24–33 (2013).
14. J. Leinonen, D. Moisseev and T. Nousiainen, “Linking snowflake microstructure to multi-frequency radar observations,” J. Geophys. Res. Atmos., 118, 3259–3270 (2013).
15. A. E. Moskalensky, M. A. Yurkin, A. I. Konokhova, D. I. Strokotov, V. M. Nekrasov, A. V. Chernyshev, G. A. Tsvetovskaya, E. D. Chikova, and V. P. Maltsev, “Accurate measurement of volume and shape of resting and activated blood platelets from light scattering,” J. Biomed. Opt. 18, 017001 (2013).
16. S. Y. Nikitin, A. V. Priezzhev, and A. E. Lugovtsov, “Analysis of laser beam scattering by an ensemble of particles modeling red blood cells in ektacytometer,” J. Quant. Spectrosc. Radiat. Transfer 121, 1–8 (2013).
17. B. Sun, P. Yang, and G. W. Kattawar, “Many-body iterative T-matrix method for large aspect ratio particles,” J. Quant. Spectrosc. Radiat. Transfer 127, 165–175 (2013).
18. F. Teschl, W. L. Randeu, and R. Teschl, “Single-scattering of preferentially oriented ice crystals at centimeter and millimeter wavelengths,” Atmos. Res. 119, 112–119 (2013).
19. J. Tyynelä, J. Leinonen, C. D. Westbrook, D. Moisseev, and T. Nousiainen, “Applicability of the Rayleigh-Gans approximation for scattering by snowflakes at microwave frequencies in vertical incidence,” J. Geophys. Res.: Atmos. 118, 1826–1839 (2013).
20. J. Um and G. M. McFarquhar, “Optimal numerical methods for determining the orientation averages of single-scattering properties of atmospheric ice crystals,” J. Quant. Spectrosc. Radiat. Transfer 127, 207–223 (2013).
21. S. Wojtkiewicz, P. Sawosz, M. Kostecki, and A. Sokolowska, “Optical method for characterization of nanoplates in lyosol,” Microel. Engin. 108, 121–126 (2013).
22. Y. Xie, L. Carbone, C. Nobile, V. Grillo, S. D’Agostino, F. Della Sala, C. Giannini, D. Altamura, C. Oelsner, et al., “Metallic-like stoichiometric copper sulfide nanocrystals: phase- and shape-selective synthesis, near-infrared surface plasmon resonance properties, and their modeling,” ACS Nano 7, 7352–7369 (2013).
23. P. Yang, L. Bi, B. A. Baum, K.-N. Liou, G. W. Kattawar, M. I. Mishchenko, and B. Cole, “Spectrally consistent scattering, absorption, and polarization properties of atmospheric ice crystals at wavelengths from 0.2 to 100 μm,” J. Atmos. Sci. 70, 330–347 (2013).
24. C. Yuen and Q. Liu, “Optimization of Fe3O4@Ag nanoshells in magnetic field-enriched surface-enhanced resonance Raman scattering for malaria diagnosis,” Analyst 138, 6494–6500 (2013).
25. M. A. Yurkin, “Symmetry relations for the Mueller scattering matrix integrated over the azimuthal angle,” J. Quant. Spectrosc. Radiat. Transfer 131, 82–87 (2013).
26. M. A. Yurkin and M. Kahnert, “Light scattering by a cube: accuracy limits of the discrete dipole approximation and the T-matrix method,” J. Quant. Spectrosc. Radiat. Transfer 123, 176–183 (2013).
27. P.-W. Zhai, Y. Hu, C. R. Trepte, D. M. Winker, D. B. Josset, P. L. Lucker, and G. W. Kattawar, “Inherent optical properties of the coccolithophore: Emiliania huxleyi,” Opt. Express 21, 17625–17638 (2013).
28. J. Zhang, Y. Feng, M. S. Moran, J. Q. Lu, L. V. Yang, Y. Sa, N. Zhang, L. Dong, and X.-H. Hu, “Analysis of cellular objects through diffraction images acquired by flow cytometry,” Opt. Express 21, 24819–24828 (2013).
29. Q. Zhang, J. J. Xiao, X. M. Zhang, Y. Yao, and H. Liu, “Reversal of optical binding force by Fano resonance in plasmonic nanorod heterodimer,” Opt. Express 21, 6601–6608 (2013).
30. Q. Zhang, J. J. Xiao, X. M. Zhang, and Y. Yao, “Optical binding force of gold nanorod dimers coupled to a metallic slab,” Opt. Commun. 301–302, 121–126 (2013).

2012 (15)

1. F. Caramanica, “A method based on particle swarm optimization to retrieve the shape of red blood cells: a preliminary assessment,” Prog. Electromag. Res. M 27, 109–117 (2012).
2. K. F. Evans, J. R. Wang, D. O’C Starr, G. Heymsfield, L. Li, L. Tian, R. P. Lawson, A. J. Heymsfield, and A. Bansemer, “Ice hydrometeor profile retrieval algorithm for high-frequency microwave radiometers: application to the CoSSIR instrument during TC4,” Atmos. Meas. Tech. 5, 2277–2306 (2012).
3. M. Gao, Y. You, P. Yang, and G. W. Kattawar, “Backscattering properties of small layered plates: a model for iridosomes,” Opt. Express 20, 25111–25120 (2012).
4. M. Kahnert, T. Nousiainen, M. A. Thomas, and J. Tyynelä, “Light scattering by particles with small-scale surface roughness: Comparison of four classes of model geometries,” J. Quant. Spectrosc. Radiat. Transfer 113, 2356–2367 (2012).
5. J. Kalkman, A. V. Bykov, G. J. Streekstra, and T. G. van Leeuwen, “Multiple scattering effects in Doppler optical coherence tomography of flowing blood,” Phys. Med. Biol. 57, 1907–1917 (2012).
6. J. Lee, J. Kim, P. Yang, and N. C. Hsu, “Improvement of aerosol optical depth retrieval from MODIS spectral reflectance over the global ocean using new aerosol models archived from AERONET inversion data and tri-axial ellipsoidal dust database,” Atmos. Chem. Phys. 12, 7087–7102 (2012).
7. J. Leinonen, S. Kneifel, D. Moisseev, J. Tyynelä, S. Tanelli, and T. Nousiainen, “Evidence of nonspheroidal behavior in millimeter-wavelength radar observations of snowfall,” J. Geophys. Res. 117, D18205 (2012).
8. C. Liu, L. Bi, R. L. Panetta, P. Yang, and M. A. Yurkin, “Comparison between the pseudo-spectral time domain method and the discrete dipole approximation for light scattering simulations,” Opt. Express 20, 16763–16776 (2012).
9. X. Liu, S. Ding, L. Bi, and P. Yang, “On the use of scattering kernels to calculate ice cloud bulk optical properties,” J. Atmos. Oceanic Technol. 29, 50–63 (2012).
10. H. Ma, P. M. Bendix, and L. B. Oddershede, “Large-scale orientation dependent heating from a single irradiated gold nanorod,” Nano Lett. 12, 3954–3960 (2012).
11. K. Schmidt, M. A. Yurkin, and M. Kahnert, “A case study on the reciprocity in light scattering computations,” Opt. Express 20, 23253–23274 (2012).
12. Y. Xie, P. Yang, K.-N. Liou, P. Minnis, and D. P. Duda, “Parameterization of contrail radiative properties for climate studies,” Geophys. Res. Lett. 39, L00F02 (2012).
13. X. Zhang, D. J. Gray, Y. Huot, Y. You, and L. Bi, “Comparison of optically derived particle size distributions: scattering over the full angular range versus diffraction at near forward angles,” Appl. Opt. 51, 5085–5099 (2012).
14. P. Zijlstra, P. M. R. Paulo, and M. Orrit, “Optical detection of single non-absorbing molecules using the surface plasmon resonance of a gold nanorod,” Nature Nanotechnology 7, 379–382 (2012).
15. M. Zimmermann, A. Tausendfreund, S. Patzelt, G. Goch, S. Kieß, M. Z. Shaikh, M. Gregoire, and S. Simon, “In-process measuring procedure for sub-100 nm structures,” J. Laser Appl. 24, 042010 (2012).

2011 (21)

1. L. Bi, P. Yang, G. W. Kattawar, Y. Hu, and B. A. Baum, “Diffraction and external reflection by dielectric faceted particles,” J. Quant. Spectrosc. Radiat. Transfer 112, 163-173 (2011).
2. L. Bi , P. Yang. G. W. Kattawar, Y. Hu, and B. A. Baum, “Scattering and absorption of light by ice particles: Solution by a new physical-geometric optics hybrid method,” J. Quant. Spectrosc. Radiat. 112, 1492-1508 (2011).
3. D. N. Chigrin, C. Kremers, and S. V. Zhukovsky, “Plasmonic nanoparticle monomers and dimers: from nanoantennas to chiral metamaterials,” Appl. Phys. B 105, 81-97 (2011).
4. S. D’Agostino, and F. Della Sala, “Silver nanourchins in plasmonics: Theoretical investigation on the optical properties of the branches,” J. Phys. Chem. C 115, 11934–11940 (2011).
5. V. G. Farafonov and V. B. Il’in, “On scattering of light by small axially symmetric particles,” Opt. Spectrosc. 111, 824–831 (2011).
6. V. G. Farafonov, A. A. Vinokurov, and S. V. Barkanov, “Electrostatic solution and rayleigh approximation for small nonspherical particles in a spheroidal basis,” Opt. Spectrosc. 111, 980–992 (2011).
7. J. Gasteiger, S. Groß, V. Freudenthaler, and M. Wiegner, “Volcanic ash from Iceland over Munich: mass concentration retrieved from ground-based remote sensing measurements,” Atmos. Chem. Phys. 11, 2209-2223 (2011).
8. J. Gasteiger, M. Wiegner, S. Groß, V. Freudenthaler, C. Toledano, M. Tesche, and K. Kandler, “Modelling lidar-relevant optical properties of complex mineral dust aerosols,” Tellus B 63, 725-741 (2011).
9. M. Huntemann, G. Heygster, and G. Hong, “Discrete dipole approximation simulations on GPUs using OpenCL--Application on cloud ice particles,” J. Comput. Sci. 2, 262-271 (2011).
10. V. B. Il’in and V. G. Farafonov, “Rayleigh approximation for axisymmetric scatterers,” Opt. Lett. 36, 4080-4082 (2011).
11. C. Kremers and D. N. Chigrin, “Light scattering on nanowire antennas: A semi-analytical approach,” Photon. Nanostruct. Fundam. Applic. 9, 358-366 (2011).
12. K. Lumme and A. Penttilä, “Model of light scattering by dust particles in the solar system: Applications to cometary comae and planetary regoliths,” J. Quant. Spectrosc. Radiat. Transfer 112, 1658-1670 (2011).
13. K. Muinonen and T. Pieniluoma, “Light scattering by Gaussian random ellipsoid particles: First results with discrete-dipole approximation,” J. Quant. Spectrosc. Radiat. 112, 1747-1752 (2011).
14. K. Muinonen, J. Tyynelä, E. Zubko, H. Lindqvist, A. Penttilä and G. Videen, “Polarization of light backscattered by small particles,” J. Quant. Spectrosc. Radiat. 112 2193–2212 (2011).
15. M. Z. Shaikh, S. Kieß, M. Gregoire, S. Simon, A. Tausendfreund, M. Zimmermann, and G. Goch, “In-process characterization tool for optically produced sub-100-nm structures,” J. Vacuum Sci. Tech. B 29, 051807 (2011).
16. E. Shaviv, O. Schubert, M. Alves-Santos, G. Goldoni, R. Di Felice, F. Valle, N. Del Fatti, U. Banin, and C. Snnichsen, “Absorption properties of metal–semiconductor hybrid nanoparticles,” ACS Nano 5, 4712–4719 (2011).
17. J. Tyynelä, J. Leinonen, D. Moisseev, and T. Nousiainen, “Radar backscattering from snowflakes: comparison of fractal, aggregate, and soft spheroid models,” J. Atmos. Oceanic Technol. 28, 1365–1372 (2011).
18. P. Yang, M. Wendisch, L. Bi, G. Kattawar, M. Mishchenko, and Y. Hu, “Dependence of extinction cross-section on incident polarization state and particle orientation,” J. Quant. Spectrosc. Radiat. Transfer 112, 2035–2039 (2011).
19. B. Yi, C. N. Hsu, P. Yang, and S.-C. Tsay, “Radiative transfer simulation of dust-like aerosols: Uncertainties from particle shape and refractive index,” J. Aeros. Sci. 42, 631-644 (2011).
20. M. A. Yurkin and A. G. Hoekstra,“The discrete-dipole-approximation code ADDA: capabilities and known limitations,” J. Quant. Spectrosc. Radiat. 112, 2234-2247 (2011).
21. Y. Xie, P. Yang, G. W. Kattawar, B. A. Baum, and Y. Hu, “Simulation of the optical properties of plate aggregates for application to the remote sensing of cirrus clouds,” Appl. Opt. 50, 1065-1081 (2011).

2010 (11)

1. L. Bi, P. Yang and G. W. Kattawar, “Edge-effect contribution to the extinction of light by dielectric disks and cylindrical particles,” Appl. Opt. 49, 4641-4646 (2010).
2. L. Bi, P. Yang, G. W. Kattawar, and R. Kahn, “Modeling optical properties of mineral aerosol particles by using nonsymmetric hexahedra,” Appl. Opt. 49, 334-342 (2010).
3. S. D’Agostino and F. D. Sala, “Active role of oxide layers on the polarization of plasmonic nanostructures,” ACS Nano 4, 4117-4125 (2010).
4. S. D’Agostino and F. Della Sala, “Electromagnetic modelling of the optical behaviour of silver nanospheres on dielectric substrates: The role of a silver buffer layer,” Superlat. Microstruct. 47, 55–59 (2010).
5. K. V. Gilev, E. Eremina, M. A. Yurkin, and V. P. Maltsev, “Comparison of the discrete dipole approximation and the discrete source method for simulation of light scattering by red blood cells,” Opt. Express 18, 5681-5690 (2010).
6. R. K. Harrison and A. Ben-Yakar, “Role of near-field enhancement in plasmonic laser nanoablation using gold nanorods on a silicon substrate,” Opt. Express 18, 22556–22571 (2010).
7. Z. Meng, P. Yang, G. W. Kattawar, L. Bi, K. Liou, and I. Laszlo, “Single-scattering properties of tri-axial ellipsoidal mineral dust aerosols: A database for application to radiative transfer calculations,” J. Aeros. Sci. 41, 501-512 (2010).
8. F. Teschl, W. L. Randeu, and R. Teschl, “Microwave scattering from ice crystals: how much parameters can differ from equal volume spheres,” Adv. Geosci. 25, 127-133 (2010).
9. C. Yuen, W. Zheng, and Z. Huang, “Optimization of extinction efficiency of gold-coated polystyrene bead substrates improves surface-enhanced Raman scattering effects by post-growth microwave heating treatment,” J. Raman Spectrosc. 41, 374-380 (2010).
10. M. A. Yurkin, D. de Kanter, and A. G. Hoekstra, “Accuracy of the discrete dipole approximation for simulation of optical properties of gold nanoparticles,” J. Nanophoton. 4, 041585-15 (2010).
11. M. A. Yurkin, M. Min, and A. G. Hoekstra, “Application of the discrete dipole approximation to very large refractive indices: Filtered coupled dipoles revived,” Phys. Rev. E 82, 036703-12 (2010).

2009 (11)

1. L. Bi, P. Yang, G. W. Kattawar, and R. Kahn, “Single-scattering properties of triaxial ellipsoidal particles for a size parameter range from the Rayleigh to geometric-optics regimes,” Appl. Opt. 48, 114-126 (2009).
2. S. D'Agostino, P. P. Pompa, R. Chiuri, R. J. Phaneuf, D. G. Britti, R. Rinaldi, R. Cingolani, and F. Della Sala, “Enhanced fluorescence by metal nanospheres on metal substrates,” Opt. Lett. 34, 2381-2383 (2009).
3. Y. Grynko and S. Pulbere, “Discrete dipole approximation simulations of light reflection from flat non-transparent particles with rough surfaces,” J. Quant. Spectrosc. Radiat. Transfer 110, 1382-1391 (2009).
4. H. Lindqvist, K. Muinonen, and T. Nousiainen, “Light scattering by coated Gaussian and aggregate particles,” J. Quant. Spectrosc. Radiat. Transfer 110, 1398-1410 (2009).
5. J. McDonald, A. Golden, and S. G. Jennings, “OpenDDA: a novel high-performance computational framework for the discrete dipole approximation,” Int. J. High Perf. Comp. Appl. 23, 42-61 (2009).
6. A. Penttilä and K. Lumme, “The effect of the properties of porous media on light scattering,” J. Quant. Spectrosc. Radiat. Transfer 110, 1993-2001 (2009).
7. A. V. Priezzhev, S. Y. Nikitin, and A. E. Lugovtsov, “Ray-wave approximation for the calculation of laser light scattering by transparent dielectric particles, mimicking red blood cells or their aggregates,” J. Quant. Spectrosc. Radiat. Transfer 110, 1535-1544 (2009).
8. V. Schmidt and T. Wriedt, “T-matrix method for biaxial anisotropic particles,” J. Quant. Spectrosc. Radiat. Transfer 110, 1392-1397 (2009).
9. D. I. Strokotov, M. A. Yurkin, K. V. Gilev, D. R. van Bockstaele, A. G. Hoekstra, N. B. Rubtsov, and V. P. Maltsev, “Is there a difference between T- and B-lymphocyte morphology?,” J. Biomed. Opt. 14, 064036-12 (2009).
10. F. Teschl, W. L. Randeu, and R. Teschl, “Single scattering from frozen hydrometeors at microwave frequencies,” Atmos. Res. 94, 564-578 (2009).
11. J. Tyynelä, T. Nousiainen, S. Göke, and K. Muinonen, “Modeling C-band single scattering properties of hydrometeors using discrete-dipole approximation and T-matrix method,” J. Quant. Spectrosc. Radiat. Transfer 110, 1654-1664 (2009).

2008 (7)

1. J. Alegret, T. Rindzevicius, T. Pakizeh, Y. Alaverdyan, L. Gunnarsson, and M. Käll, “Plasmonic properties of silver trimers with trigonal symmetry fabricated by electron-beam lithography,” J. Phys. Chem. C 112, 14313-14317 (2008).
2. D. J. Cho, F. Wang, X. Zhang, and Y. R. Shen, “Contribution of the electric quadrupole resonance in optical metamaterials,” Phys. Rev. B 78, 121101 (2008).
3. O. Ekici, R. K. Harrison, N. J. Durr, D. S. Eversole, M. Lee, and A. Ben-Yakar, “Thermal analysis of gold nanorods heated with femtosecond laser pulses,” J. Phys. D 41, 185501 (2008).
4. A. E. Lugovtsov, S. Y. Nikitin, and A. V. Priezzhev, “Ray-wave approximation for calculating laser radiation scattering by a transparent dielectric spheroidal particle,” Quant. Electron. 38, 606-611 (2008).
5. D. Y. Orlova, M. A. Yurkin, A. G. Hoekstra, and V. P. Maltsev, “Light scattering by neutrophils: model, simulation, and experiment,” J. Biomed. Opt. 13, 054057-7 (2008).
6. H. Parviainen and K. Lumme, “Scattering from rough thin films: discrete-dipole-approximation simulations,” J. Opt. Soc. Am. A 25, 90-97 (2008).
7. C. Selhuber-Unkel, I. Zins, O. Schubert, C. Sönnichsen, and L. B. Oddershede, “Quantitative optical trapping of single gold nanorods,” Nano Lett. 8, 2998-3003 (2008).

2007 (5)

1. A. Penttila, E. Zubko, K. Lumme, K. Muinonen, M. A. Yurkin, B. T. Draine, J. Rahola, A. G. Hoekstra, and Y. Shkuratov, “Comparison between discrete dipole implementations and exact techniques,” J. Quant. Spectrosc. Radiat. Transfer 106, 417-436 (2007).
2. M. A. Yurkin and A. G. Hoekstra, “The discrete dipole approximation: an overview and recent developments,” J. Quant. Spectrosc. Radiat. Transfer 106, 558-589 (2007).
3. M. A. Yurkin, A. G. Hoekstra, R. S. Brock, and J. Q. Lu, “Systematic comparison of the discrete dipole approximation and the finite difference time domain method for large dielectric scatterers,” Opt. Express 15, 17902-17911 (2007).
4. M. A. Yurkin, V. P. Maltsev, and A. G. Hoekstra, “The discrete dipole approximation for simulation of light scattering by particles much larger than the wavelength,” J. Quant. Spectrosc. Radiat. Transfer 106, 546-557 (2007).
5. M. A. Yurkin, K. A. Semyanov, V. P. Maltsev, and A. G. Hoekstra, “Discrimination of granulocyte subtypes from light scattering: theoretical analysis using a granulated sphere model,” Opt. Express 15, 16561-16580 (2007).

2006 (3)

1. I. V. Kolesnikova, S. V. Potapov, M. A. Yurkin, A. G. Hoekstra, V. P. Maltsev, and K. A. Semyanov, “Determination of volume, shape and refractive index of individual blood platelets,” J. Quant. Spectrosc. Radiat. Transfer 102, 37-45 (2006).
2. M. A. Yurkin, V. P. Maltsev, and A. G. Hoekstra, “Convergence of the discrete dipole approximation. II. An extrapolation technique to increase the accuracy,” J. Opt. Soc. Am. A 23, 2592-2601 (2006).
3. M. A. Yurkin, V. P. Maltsev, and A. G. Hoekstra, “Convergence of the discrete dipole approximation. I. Theoretical analysis,” J. Opt. Soc. Am. A 23, 2578-2591 (2006).

2005 and earlier (11)

Those papers used earlier version of the code before the public release of ADDA.

1. M. A. Yurkin, K. A. Semyanov, P. A. Tarasov, A. V. Chernyshev, A. G. Hoekstra, and V. P. Maltsev, “Experimental and theoretical study of light scattering by individual mature red blood cells with scanning flow cytometry and discrete dipole approximation,” Appl. Opt. 44, 5249-5256 (2005).
2. A. G. Hoekstra, M. Frijlink, L. B. F. M. Waters, and P. M. A. Sloot, “Radiation forces in the discrete-dipole approximation,” J. Opt. Soc. Am. A 18, 1944-1953 (2001).
3. A. G. Hoekstra, M. D. Grimminck, and P. M. A. Sloot, “Large scale simulations of elastic light scattering by a fast discrete dipole approximation,” Int. J. Mod. Phys. C 9, 87-102 (1998).
4. A. G. Hoekstra, J. Rahola, and P. M. A. Sloot, “Accuracy of internal fields in volume integral equation simulations of light scattering,” Appl. Opt. 37, 8482-8497 (1998).
5. A. G. Hoekstra, P. M. A. Sloot, F. van der Linden, M. van Muiswinkel, J. J. J. Vesseur, and L. O. Hertzberger, “Native and generic parallel programming environments on a transputer and a PowerPC platform,” Concurrency Pract. Ex. 8, 19-46 (1996).
6. A. G. Hoekstra and P. M. A. Sloot, “Coupled dipole simulations of elastic light scattering on parallel systems,” Int. J. Mod. Phys. C 6, 663-679 (1995).
7. A. G. Hoekstra and P. M. A. Sloot, “New computational techniques to simulate light-scattering from arbitrary particles,” Part. Part. Sys. Charact. 11, 189-193 (1994).
8. A. G. Hoekstra and P. M. A. Sloot, “Dipolar unit size in coupled-dipole calculations of the scattering matrix elements,” Opt. Lett. 18, 1211-1213 (1993).
9. P. M. A. Sloot and A. G. Hoekstra, “Light scattering simulations on a massively parallel computer at the IC3A,” Transput. Applic. 1, 42-49 (1993).
10. P. M. A. Sloot and A. G. Hoekstra, “Implementation of a parallel conjugate gradient method for simulation of elastic light scattering,” Comp. Phys. 6, 323 (1992).
11. A. G. Hoekstra, L. O. Hertzberger, and P. M. A. Sloot, “Simulation of elastic light scattering on distributed memory machines,” Bull. Am. Phys. Soc. 36, 1798 (1991).