diff --git a/scripts/pathwayParameterAdvising.py b/scripts/pathwayParameterAdvising.py index 1c728d5..141c587 100755 --- a/scripts/pathwayParameterAdvising.py +++ b/scripts/pathwayParameterAdvising.py @@ -1,9 +1,8 @@ import os import argparse -import networkx as nx import numpy as np import sys -__version__ = 0.10 +__version__ = "0.1.0" """ Author: Chris Magnano @@ -16,7 +15,7 @@ def main(): #Handle command line arguments - parser = argparse.ArgumentParser(description="The pathway parameter advisor creates a ranking of pathways based on their topological distance to a set of reference pathways. Version %0.2f, released under the MIT liscense."%(__version__)) + parser = argparse.ArgumentParser(description="The pathway parameter advisor creates a ranking of pathways based on their topological distance to a set of reference pathways. Version %s, released under the MIT license."%(__version__)) parser.add_argument("--genPathwayGraphlets", help="File where each line is a graphlets file of a generated pathway.",required=True) parser.add_argument("--refPathwayGraphlets", help="File where each line is a graphlets file of a reference pathway.",required=True) parser.add_argument("--outFile", default="parameterRanking.txt", help="File to store output in.")