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environment.yml
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name: ucrna
channels:
- anaconda
- biobakery
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- _r-mutex=1.0.1=anacondar_1
- binutils_impl_linux-64=2.36.1=h193b22a_1
- binutils_linux-64=2.36=hf3e587d_33
- bioconductor-annotate=1.70.0=r41hdfd78af_0
- bioconductor-annotationdbi=1.54.0=r41hdfd78af_0
- bioconductor-annotationforge=1.34.0=r41hdfd78af_0
- bioconductor-biobase=2.52.0=r41hd029910_0
- bioconductor-biocfilecache=2.0.0=r41hdfd78af_0
- bioconductor-biocgenerics=0.38.0=r41hdfd78af_0
- bioconductor-biocparallel=1.26.0=r41h399db7b_0
- bioconductor-biomart=2.48.0=r41hdfd78af_0
- bioconductor-biostrings=2.60.0=r41hd029910_0
- bioconductor-category=2.58.0=r41hdfd78af_0
- bioconductor-cemitool=1.16.0=r41hdfd78af_0
- bioconductor-clusterprofiler=4.0.0=r41hdfd78af_0
- bioconductor-delayedarray=0.18.0=r41hd029910_0
- bioconductor-deseq2=1.32.0=r41h399db7b_0
- bioconductor-do.db=2.9=r41hdfd78af_11
- bioconductor-dose=3.18.0=r41hdfd78af_0
- bioconductor-enrichplot=1.12.0=r41hdfd78af_0
- bioconductor-fgsea=1.18.0=r41h399db7b_0
- bioconductor-genefilter=1.74.0=r41hba52eb8_0
- bioconductor-geneplotter=1.70.0=r41hdfd78af_0
- bioconductor-genomeinfodb=1.28.0=r41hdfd78af_0
- bioconductor-genomeinfodbdata=1.2.6=r41hdfd78af_0
- bioconductor-genomicranges=1.44.0=r41hd029910_0
- bioconductor-ggtree=3.0.1=r41hdfd78af_0
- bioconductor-go.db=3.13.0=r41hdfd78af_0
- bioconductor-gosemsim=2.18.0=r41h399db7b_0
- bioconductor-gostats=2.58.0=r41hdfd78af_0
- bioconductor-graph=1.70.0=r41hd029910_0
- bioconductor-gseabase=1.54.0=r41hdfd78af_0
- bioconductor-impute=1.66.0=r41hacda110_0
- bioconductor-iranges=2.26.0=r41hd029910_0
- bioconductor-keggrest=1.32.0=r41hdfd78af_0
- bioconductor-limma=3.48.0=r41hd029910_0
- bioconductor-m3c=1.14.0=r41hdfd78af_0
- bioconductor-matrixgenerics=1.4.0=r41hdfd78af_0
- bioconductor-pcaexplorer=2.18.0=r41hdfd78af_0
- bioconductor-preprocesscore=1.54.0=r41hd029910_0
- bioconductor-qvalue=2.24.0=r41hdfd78af_0
- bioconductor-rbgl=1.68.0=r41h399db7b_0
- bioconductor-rgraphviz=2.36.0=r41h399db7b_0
- bioconductor-s4vectors=0.30.0=r41hd029910_0
- bioconductor-summarizedexperiment=1.22.0=r41hdfd78af_0
- bioconductor-topgo=2.44.0=r41hdfd78af_0
- bioconductor-treeio=1.16.1=r41hdfd78af_0
- bioconductor-xvector=0.32.0=r41hd029910_0
- bioconductor-zlibbioc=1.38.0=r41hd029910_0
- bwidget=1.9.14=ha770c72_0
- bzip2=1.0.8=h7f98852_4
- c-ares=1.17.1=h7f98852_1
- ca-certificates=2020.10.14=0
- cairo=1.16.0=h6cf1ce9_1008
- certifi=2021.5.30=py39hf3d152e_0
- colormath=3.0.0=py_2
- curl=7.77.0=hea6ffbf_0
- decorator=5.0.9=pyhd8ed1ab_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.13.1=hba837de_1005
- fonts-anaconda=1=h8fa9717_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.10.4=h0708190_1
- fribidi=1.0.10=h36c2ea0_0
- gcc_impl_linux-64=9.3.0=h70c0ae5_19
- gcc_linux-64=9.3.0=hf25ea35_33
- gettext=0.19.8.1=h0b5b191_1005
- gfortran_impl_linux-64=9.3.0=hc4a2995_19
- gfortran_linux-64=9.3.0=hdc58fab_33
- gmp=6.2.1=h58526e2_0
- graphite2=1.3.13=h58526e2_1001
- gsl=2.6=he838d99_2
- gxx_impl_linux-64=9.3.0=hd87eabc_19
- gxx_linux-64=9.3.0=h3fbe746_33
- harfbuzz=2.8.2=h83ec7ef_0
- icu=68.1=h58526e2_0
- jbig=2.1=h7f98852_2003
- jpeg=9d=h36c2ea0_0
- kernel-headers_linux-64=2.6.32=he073ed8_14
- krb5=1.19.1=hcc1bbae_0
- ld_impl_linux-64=2.36.1=hea4e1c9_1
- lerc=2.2.1=h9c3ff4c_0
- libblas=3.9.0=9_openblas
- libcblas=3.9.0=9_openblas
- libcurl=7.77.0=h2574ce0_0
- libdeflate=1.7=h7f98852_5
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.3=h58526e2_2
- libgcc-devel_linux-64=9.3.0=h7864c58_19
- libgit2=1.1.1=hee63804_1
- libglib=2.68.3=h3e27bee_0
- libiconv=1.16=h516909a_0
- liblapack=3.9.0=9_openblas
- libnghttp2=1.43.0=h812cca2_0
- libopenblas=0.3.15=pthreads_h8fe5266_1
- libpng=1.6.37=h21135ba_2
- libssh2=1.9.0=ha56f1ee_6
- libstdcxx-devel_linux-64=9.3.0=hb016644_19
- libtiff=4.3.0=hf544144_1
- libuuid=2.32.1=h7f98852_1000
- libwebp-base=1.2.0=h7f98852_2
- libxcb=1.13=h7f98852_1003
- libxml2=2.9.12=h72842e0_0
- lz4-c=1.9.3=h9c3ff4c_0
- make=4.3=hd18ef5c_1
- mscorefonts=0.0.1=3
- ncurses=6.2=h58526e2_4
- networkx=2.5=py_0
- numpy=1.21.1=py39hdbf815f_0
- openssl=1.1.1k=h7f98852_0
- pandoc=2.14.1=h7f98852_0
- pango=1.48.7=hb8ff022_0
- pcre=8.45=h9c3ff4c_0
- pcre2=10.37=h032f7d1_0
- pip=21.2.1=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- pthread-stubs=0.4=h36c2ea0_1001
- python=3.9.6=h49503c6_1_cpython
- python_abi=3.9=2_cp39
- r-abind=1.4_5=r41hc72bb7e_1003
- r-acepack=1.4.1=r41h859d828_1006
- r-ape=5.5=r41h306847c_0
- r-aplot=0.0.6=r41hc72bb7e_0
- r-askpass=1.1=r41hcfec24a_2
- r-assertthat=0.2.1=r41hc72bb7e_2
- r-backports=1.2.1=r41hcfec24a_0
- r-base=4.1.0=hb67fd72_2
- r-base64enc=0.1_3=r41hcfec24a_1004
- r-bh=1.75.0_0=r41hc72bb7e_0
- r-bibtex=0.4.2.3=r41hcfec24a_0
- r-biocmanager=1.30.16=r41hc72bb7e_0
- r-bit=4.0.4=r41hcfec24a_0
- r-bit64=4.0.5=r41hcfec24a_0
- r-bitops=1.0_7=r41hcfec24a_0
- r-blob=1.2.2=r41hc72bb7e_0
- r-boot=1.3_28=r41hc72bb7e_0
- r-brew=1.0_6=r41hc72bb7e_1003
- r-brio=1.1.2=r41hcfec24a_0
- r-broom=0.7.8=r41hc72bb7e_0
- r-bslib=0.2.5.1=r41hc72bb7e_0
- r-cachem=1.0.5=r41hcfec24a_0
- r-callr=3.7.0=r41hc72bb7e_0
- r-car=3.0_11=r41hc72bb7e_0
- r-cardata=3.0_4=r41hc72bb7e_0
- r-catools=1.18.2=r41h03ef668_0
- r-cellranger=1.1.0=r41hc72bb7e_1003
- r-checkmate=2.0.0=r41hcfec24a_1
- r-cli=3.0.1=r41hc72bb7e_0
- r-clipr=0.7.1=r41hc72bb7e_0
- r-cluster=2.1.2=r41h859d828_0
- r-coda=0.19_4=r41hc72bb7e_0
- r-codetools=0.2_18=r41hc72bb7e_0
- r-colorspace=2.0_2=r41hcfec24a_0
- r-colourpicker=1.1.0=r41hc72bb7e_0
- r-commonmark=1.7=r41hcfec24a_1002
- r-conquer=1.0.2=r41h6dc32e9_1
- r-corpcor=1.6.9=r41hc72bb7e_1003
- r-corrplot=0.90=r41hc72bb7e_0
- r-covr=3.5.1=r41h03ef668_0
- r-cowplot=1.1.1=r41hc72bb7e_0
- r-cpp11=0.3.1=r41hc72bb7e_0
- r-crayon=1.4.1=r41hc72bb7e_0
- r-credentials=1.3.1=r41hc72bb7e_0
- r-crosstalk=1.1.1=r41hc72bb7e_0
- r-curl=4.3.2=r41hcfec24a_0
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- r-dbi=1.1.1=r41hc72bb7e_0
- r-dbplyr=2.1.1=r41hc72bb7e_0
- r-dendextend=1.15.1=r41hc72bb7e_0
- r-deoptimr=1.0_9=r41hc72bb7e_0
- r-desc=1.3.0=r41hc72bb7e_0
- r-devtools=2.4.2=r41hc72bb7e_0
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- r-digest=0.6.27=r41h03ef668_0
- r-doparallel=1.0.16=r41hc72bb7e_0
- r-dosnow=1.0.19=r41hc72bb7e_1
- r-downloader=0.4=r41hc72bb7e_1003
- r-dplyr=1.0.7=r41h03ef668_0
- r-dqrng=0.3.0=r41h03ef668_0
- r-dt=0.18=r41hc72bb7e_0
- r-dtplyr=1.1.0=r41hc72bb7e_0
- r-dynamictreecut=1.63_1=r41hc72bb7e_1003
- r-egg=0.4.5=r41hc72bb7e_2
- r-ellipsis=0.3.2=r41hcfec24a_0
- r-evaluate=0.14=r41hc72bb7e_2
- r-extrafont=0.17=r41ha770c72_1002
- r-extrafontdb=1.0=r41hc72bb7e_1003
- r-fansi=0.4.2=r41hcfec24a_0
- r-farver=2.1.0=r41h03ef668_0
- r-fastcluster=1.2.3=r41h9c3ff4c_0
- r-fastmap=1.1.0=r41h03ef668_0
- r-fastmatch=1.1_3=r41hcfec24a_0
- r-filelock=1.0.2=r41hcfec24a_1002
- r-fit.models=0.64=r41hc72bb7e_0
- r-fnn=1.1.3=r41h03ef668_2
- r-forcats=0.5.1=r41hc72bb7e_0
- r-foreach=1.5.1=r41hc72bb7e_0
- r-foreign=0.8_81=r41hcfec24a_0
- r-formatr=1.11=r41hc72bb7e_0
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- r-fs=1.5.0=r41h03ef668_0
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- r-futile.options=1.0.1=r41hc72bb7e_1002
- r-gargle=1.2.0=r41hc72bb7e_0
- r-gclus=1.3.2=r41hc72bb7e_2
- r-gdtools=0.2.3=r41h42e24d8_0
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- r-gert=1.3.1=r41hbd84cd2_0
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- r-ggplot2=3.3.5=r41hc72bb7e_0
- r-ggplotify=0.0.7=r41hc72bb7e_0
- r-ggpmisc=0.4.0=r41hc72bb7e_0
- r-ggpp=0.4.1=r41hc72bb7e_0
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- r-googledrive=2.0.0=r41hc72bb7e_0
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- r-gridextra=2.3=r41hc72bb7e_1003
- r-gridgraphics=0.5_1=r41hc72bb7e_0
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- r-lambda.r=1.2.4=r41hc72bb7e_1
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- r-lazyeval=0.2.2=r41hcfec24a_2
- r-lifecycle=1.0.0=r41hc72bb7e_0
- r-lme4=1.1_27.1=r41h03ef668_0
- r-locfit=1.5_9.4=r41hcfec24a_1
- r-lubridate=1.7.10=r41h03ef668_0
- r-magrittr=2.0.1=r41hcfec24a_1
- r-maptools=1.1_1=r41hcfec24a_0
- r-markdown=1.1=r41hcfec24a_1
- r-mass=7.3_54=r41hcfec24a_0
- r-matrix=1.3_4=r41he454529_0
- r-matrixcalc=1.0_4=r41hc72bb7e_0
- r-matrixmodels=0.5_0=r41hc72bb7e_0
- r-matrixstats=0.59.0=r41hcfec24a_0
- r-mclust=5.4.7=r41h52d45c5_0
- r-memoise=2.0.0=r41hc72bb7e_0
- r-mgcv=1.8_36=r41he454529_0
- r-mime=0.11=r41hcfec24a_0
- r-miniui=0.1.1.1=r41hc72bb7e_1002
- r-minqa=1.2.4=r41h5ee154c_1006
- r-modelr=0.1.8=r41hc72bb7e_0
- r-munsell=0.5.0=r41hc72bb7e_1003
- r-mvtnorm=1.1_2=r41h859d828_0
- r-network=1.17.1=r41hcfec24a_0
- r-nlme=3.1_152=r41h859d828_0
- r-nloptr=1.2.2.2=r41h03ef668_0
- r-nmf=0.21.0=r41h03ef668_1004
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prefix: /home/sukmb465/miniconda3/envs/ucrna