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the GMOD database schema
PLpgSQL 39 25
Source code for JBrowse 2, a modern React-based genome browser
TypeScript 216 63
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
JavaScript 464 198
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy 131 85
JBrowse 2 plugin for editing annotations on an Apollo server
Read .2bit files with pure JS. Works in node or webpack.
A parser for the BED format including autoSql support
Parse BAM and BAM index files in javascript for node and the browser
Read CRAM v3 and v2 in node or in the browser
add AbortController support to a cache of async requests
Read JBrowse v1 nested containment list feature stores from modern JS
Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi
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