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rust-bedtools-pangenome-multi-merge

  • rust bedtools pangenome merge for multimerge.
  • anchor alignment approach to pangenome merge, sort the range and then intsert into different structs.
  • no need to sort the file.
  • please see the last commit message and if it says compiled binary then it is completed or else still in development version.
cargo build
 ./target/debug/rust-bedtools-pangenome-merge -h
 Usage: rust-bedtools-pangenome-merge <BED1> <BED2> <FASTA>

 Arguments:
 <BED1>   please provide the path to the first alignment file
 <BED2>   please provide the reference fasta file
 <FASTA>  please provide the path to the reference fasta file

 Options:
 -h, --help     Print help
 -V, --version  Print version

Gaurav Sablok