create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks
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Aug 7, 2024 - Python
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bed-files
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Fast interval intersection library
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Jan 18, 2025 - C++
Lightweight Python interfaces for reading, writing, and querying Genomic Regions (BED)
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Dec 6, 2024 - Python
Python module and CLI tool to perform operations on BED files
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Jan 23, 2020 - Python
Software tools to collect Coronavirus sequences and create protein and nucleotide HMMs
bioinformatics alignments bed-files hmms cov coronavirus covid-19 covid covid19 sars-cov-2 covid19-data covid-bioinformatics analyze-coronavirus-sequences
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Feb 8, 2023 - Python
Which ESR1 and PGR binding sites are functional?
tad transcription-factor-binding bed-files chipseq transcription-factor-binding-site progesterrone tf-binding-motif chipseq-region estrogen progesterone-resceptor estrogen-receptor hand2 transcription-control
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Dec 11, 2018 - Python
Bash scripts replicating the commands from sandbox.bio's interactive bioinformatics tutorials, organized by categories such as Data Exploration, File Formats, Quality Control, and Data Analysis.
bash bam-files bioinformatics quality-control computational-biology data-analysis data-wrangling variant-calling data-exploration command-line-tools unix-shell sequence-alignment fastq-files bed-files file-formats fasta-files genomic-data bioinformatics-workflows sandbox-bio sandbox-bio-tutorials
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Jan 22, 2025 - Shell
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