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Green-Chanchamayo

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@cmorganl cmorganl released this 19 Oct 18:51
· 1178 commits to master since this release

This release is a vanilla reimplementation of the original MLTreeMap codebase (written in Perl) but written in Python. There are a few minor changes such as new functions to help with the user experience and multiprocessing of binaries. There are no algorithmic changes that would cause results between the original Perl version and this Python version to differ but there are newer versions of binaries being used (blastn, RAxML, etc.).

As the initial release, we are beginning with green coffee, from the Chanchamayo region on the Eastern slopes of the Peruvian Andes.